pyaln
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Contents:
Installation
Tutorial of pyaln
Alignment class
Sequtils submodule
Index
pyaln
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Index
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Index
A
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C
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D
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F
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G
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H
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M
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N
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P
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R
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S
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T
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W
A
add_seq() (pyaln.Alignment method)
ali_length() (pyaln.Alignment method)
Alignment (class in pyaln)
C
column_weights() (pyaln.Alignment method)
concatenate() (pyaln.Alignment method)
consensus() (pyaln.Alignment method)
conservation_map() (pyaln.Alignment method)
copy() (pyaln.Alignment method)
D
descriptions() (pyaln.Alignment method)
F
fasta() (pyaln.Alignment method)
from_numpy() (pyaln.Alignment class method)
G
get_desc() (pyaln.Alignment method)
get_seq() (pyaln.Alignment method)
H
has_name() (pyaln.Alignment method)
M
module
pyaln.sequtils
N
n_seqs() (pyaln.Alignment method)
names() (pyaln.Alignment method)
P
position_in_ali() (pyaln.Alignment method)
position_in_seq() (pyaln.Alignment method)
position_map() (pyaln.Alignment method)
positions() (pyaln.Alignment method)
pyaln.sequtils
module
R
remove_by_index() (pyaln.Alignment method)
remove_by_name() (pyaln.Alignment method)
remove_empty_seqs() (pyaln.Alignment method)
S
same_length() (pyaln.Alignment method)
score_similarity() (pyaln.Alignment method)
sequence_identity() (in module pyaln.sequtils)
sequences() (pyaln.Alignment method)
set_desc() (pyaln.Alignment method)
set_seq() (pyaln.Alignment method)
shape (pyaln.Alignment property)
T
titles() (pyaln.Alignment method)
to_biopython() (pyaln.Alignment method)
to_numpy() (pyaln.Alignment method)
to_pandas() (pyaln.Alignment method)
trim_gaps() (pyaln.Alignment method)
W
weighted_sequence_identity() (in module pyaln.sequtils)
write() (pyaln.Alignment method)
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